<p><strong>Conclusion:</strong> Only half of the newly identified HIV cases reported in the routine aggregate system were captured in Research Electronic Data Capture. The overall health worker knowledge levels were good. The HIV CBS system with recency testing performs well in terms of completeness, flexibility, simplicity acceptability and confidentiality however, representativeness, validity, sensitivity, usefulness and stability were not satisfactory. As a result, health facilities&nbsp; should avail test kits coordination, follow up and backup operation are recommended.&nbsp;</p>